Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889573.1_cds_XP_016444283.1_39363
CDS Infomation

[gene=LOC107769571] [db_xref=GeneID:107769571] [protein=probable beta-1,4-xylosyltransferase IRX14] [protein_id=XP_016444283.1] [location=join(114901..115619,115989..116543,120480..120708)] [gbkey=CDS]
Sequence

ATGAAACAGTTAGCGGCGTTACAACAAGGTCGCCGGAGCAACAGCTTTAGAGGGCCGTTA
GATTCGCCGTCAGATGGGTCTGTTAAGTCTCCGGCGACTATTTTCTGGCTTGTGCTTCAT
GGGGTTTGCTGTTTGATCAGTTTAGTTCTGGGTTTCAGGTTTTCACGCTTAGTGTTCTTC
CTTTTGTTCACTAATAATAGCTCATCGTCAGCTCCAAACAGTGTTTTGTTTCATGATCCG
GCTAGGATGACATCATTTTCCGGTAATGGCACGGCGGGGACAGCGGCGGAGGTTGCGGTG
GTGAGGGGGAGTAGTAGTAGTAGGGTGGTGGTGGGGAGGCACGGGATATTAATACGGCCG
TGGCCCCACCCGAATGCTACTGAGGTGATGCAGGCACATAAGATAATGGAGATAGTTCAA
AGGGAACAGAAGTTGCAGTATGGTGTTAAGAGTCCGAGGGATGTGATTGTTGTGACACCA
ACATATGTGAGGACTTTTCAGACTTTGCATCTTACTGGTGTGATGCATTCTTTAATGAAT
GTGCCTTATAATGTTGTGTGGATTGTGGTGGAAGCTGGAGGAGCAACTAATGAGACCGCC
TCGTTGATAGCTAAATCAGGTTTGAAGAATACTATTCACATTGGATTACGCGAGAAGATG
CCACTTTCGTGGGAAGATCGCCATAAATTGGAGGCGAAAATGAGACTTCGCGCTTTGAGA
TATGTGAGAGAAGAGAAGTTGGACGGGATAGTGATATTTGCTGATGACAGTAATATGCAT
AGCTTAGAGATTTTTGATGAGATCCAAAAAGTGAAATGGATTGGCGCTCTGTCAGTGGGC
ATTCTTGCTCATTCGGGTGGTTCTGAGGAGGAGTTGTCGACAGTTCAGAAAGAGGAAGAG
AGGAATTTGCAATTGCCTGTTCAAGGTCCCGCTTGTAATTCATCAGACCATCTTGTTGGT
TGGCACACTTTTGATTCGTCCCCCTACTTGGAGAAGAGTGCCAGATTCATTGGTGATAGG
GCAGTTGTGCTGCCAAGGAAGCTTGAATGGGCTGGCTTTGTGTTGAATTCCAGATTGGTC
TGGAAAGATGCGGAAGATAAGCCTGAATGGGTTAAGGATTTGGATGCTGTAATGGGGGAA
AGGGAGGATGTTGAGAACCCTTTATCTTTACTGAAGGATCCTTCAATGGTGGAGCCTCTC
GGAAGTTGTGGGCGCAAAATTATGCTGTGGTGGCTCCGCGTTGAAGCACGGGCAGACAGC
AAATTCCCTGCCAGATGGATCATCGATCCTCCACTAGATGTGACTGTCCCAGCAAAACGA
ACGCCATGGCCAGATGCTCCTCCAGAGCTCCCCTCCGGTGAAAAGTTGGTCACCATGCAA
GAGCACACTGAGAAGCGCCCACCAAAAACACGATCAAGAAAACATAGTTCTCGGAGCAAG
AGAAAGCATGTAGCAAAGAACATGGACGACCGTCATTTGGCCAGGCAAGATGCGGAGAAC
TAG

Peptide Sequence

PEP ID

XP_016444283.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Nicotiana tabacum]
Sequence

MKQLAALQQGRRSNSFRGPLDSPSDGSVKSPATIFWLVLHGVCCLISLVLGFRFSRLVFF
LLFTNNSSSSAPNSVLFHDPARMTSFSGNGTAGTAAEVAVVRGSSSSRVVVGRHGILIRP
WPHPNATEVMQAHKIMEIVQREQKLQYGVKSPRDVIVVTPTYVRTFQTLHLTGVMHSLMN
VPYNVVWIVVEAGGATNETASLIAKSGLKNTIHIGLREKMPLSWEDRHKLEAKMRLRALR
YVREEKLDGIVIFADDSNMHSLEIFDEIQKVKWIGALSVGILAHSGGSEEELSTVQKEEE
RNLQLPVQGPACNSSDHLVGWHTFDSSPYLEKSARFIGDRAVVLPRKLEWAGFVLNSRLV
WKDAEDKPEWVKDLDAVMGEREDVENPLSLLKDPSMVEPLGSCGRKIMLWWLRVEARADS
KFPARWIIDPPLDVTVPAKRTPWPDAPPELPSGEKLVTMQEHTEKRPPKTRSRKHSSRSK
RKHVAKNMDDRHLARQDAEN

Transcript Sequence

Gene sequence data has not been registered.